Difference between revisions of "Latest changes"

From AutoMeKin
Jump to navigation Jump to search
 
(59 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
{| class="wikitable"
 
{| class="wikitable"
!colspan="6"|Latest revision: 1006
+
!colspan="6"|Latest revision: 1137
  
 +
|-
 +
|01/15/2024
 +
|Fixed some bugs with llcalcs.sh and improved ChemKnow algorithm (new keyword CK_minima)
 +
|-
 +
|11/07/2023
 +
|Fixed some issues with the HL calcs of fragments
 +
|-
 +
|05/12/2022
 +
|Fixed some issues with qcore calcs
 +
|-
 +
|04/26/2022
 +
|Bugfix in utils and improved performace hl calcs
 +
|-
 +
|04/13/2022
 +
|Removed STOP in diag.f. 
 +
|-
 +
|03/17/2022
 +
|Bugfix in final.sh. 
 +
|-
 +
|03/11/2022
 +
|Interface with Gaussian 16. 
 +
|-
 +
|02/03/2022
 +
|Min and Max temperatures for the kinetics set to 100 K and 9999 K, respectively. 
 +
|-
 +
|12/10/2021
 +
|Bugfixes in Python scripts that read inputfile (charge and long mopac inputs were not read correctly). 
 +
|-
 +
|12/01/2021
 +
|Bugfix in LocateTS.py. 
 +
|-
 +
|11/18/2021
 +
|Bugfix in ChemKnow. Improved torsional search
 +
|-
 +
|11/16/2021
 +
|ChemKnow and barrierless search improved. Tutorial updated
 +
|-
 +
|11/10/2021
 +
|Tutorial updated and amk-tools described
 +
|-
 +
|10/17/2021
 +
|update tables with the geometry orientation for normal mode calcls in FINALDIR (low-level one). Tutorial updated
 +
|-
 +
|10/16/2021
 +
|Tutorial updated
 +
|-
 +
|10/02/2021
 +
|Tutorial updated
 +
|-
 +
|09/25/2021
 +
|References updated in tutorial and wiki
 +
|-
 +
|09/17/2021
 +
|tutorial updated and select.sh now exectuted from WRKDIR
 +
|-
 +
|09/06/2021
 +
|Max no. of species in population.pdf set to 20
 +
|-
 +
|07/26/2021
 +
|Bugfixes in FINAL and max no. of TSs in Energy Profile set to 100
 +
|-
 +
|07/24/2021
 +
|Bugfixes in screening
 +
|-
 +
|07/23/2021
 +
|Barrierless process are now included in the search (not in the kinetics)
 +
|-
 +
|06/25/2021
 +
|Screening and rxnetwork build optimized. Adaptive selection of temp in MD optimized.
 +
|-
 +
|06/18/2021
 +
|Bugfix in select_assoc script
 +
|-
 +
|06/17/2021
 +
|Systems with charge can now be modeled with ChemKnow and BXDE
 +
|-
 +
|04/06/2021
 +
|Bugfixes in irc_analysis.sh (mopac2021) and Heuristics (crossed bonds)
 +
|-
 +
|05/28/2021
 +
|New keyword Use_LET for mopac TS optimizations
 +
|-
 +
|05/27/2021
 +
|New keywords (recalc and Hookean) and improved efficiency
 +
|-
 +
|05/14/2021
 +
|ChemKnow improved and calcfc in g09 ts opt calcs
 +
|-
 +
|05/10/2021
 +
|keyword tight_ts and bug in bxde
 +
|-
 +
|05/02/2021
 +
|kinetics module improved and bugs corrected
 +
|-
 +
|04/07/2021
 +
|in tors.sh do not consider rotation about bonds that belong to a ring
 +
|-
 +
|03/16/2021
 +
|mopac calculator updated to ase3.21.1
 +
|-
 +
|03/14/2021
 +
|Bugfixes
 
|-
 
|-
 
|02/15/2021
 
|02/15/2021
|2021 release. Revision 1006--> qcore high-level calcs available
+
|2021 release. Revision 1007--> qcore high-level calcs available
 
|-
 
|-
 
|10/20/2020
 
|10/20/2020

Latest revision as of 08:29, 15 January 2024

Latest revision: 1137
01/15/2024 Fixed some bugs with llcalcs.sh and improved ChemKnow algorithm (new keyword CK_minima)
11/07/2023 Fixed some issues with the HL calcs of fragments
05/12/2022 Fixed some issues with qcore calcs
04/26/2022 Bugfix in utils and improved performace hl calcs
04/13/2022 Removed STOP in diag.f.
03/17/2022 Bugfix in final.sh.
03/11/2022 Interface with Gaussian 16.
02/03/2022 Min and Max temperatures for the kinetics set to 100 K and 9999 K, respectively.
12/10/2021 Bugfixes in Python scripts that read inputfile (charge and long mopac inputs were not read correctly).
12/01/2021 Bugfix in LocateTS.py.
11/18/2021 Bugfix in ChemKnow. Improved torsional search
11/16/2021 ChemKnow and barrierless search improved. Tutorial updated
11/10/2021 Tutorial updated and amk-tools described
10/17/2021 update tables with the geometry orientation for normal mode calcls in FINALDIR (low-level one). Tutorial updated
10/16/2021 Tutorial updated
10/02/2021 Tutorial updated
09/25/2021 References updated in tutorial and wiki
09/17/2021 tutorial updated and select.sh now exectuted from WRKDIR
09/06/2021 Max no. of species in population.pdf set to 20
07/26/2021 Bugfixes in FINAL and max no. of TSs in Energy Profile set to 100
07/24/2021 Bugfixes in screening
07/23/2021 Barrierless process are now included in the search (not in the kinetics)
06/25/2021 Screening and rxnetwork build optimized. Adaptive selection of temp in MD optimized.
06/18/2021 Bugfix in select_assoc script
06/17/2021 Systems with charge can now be modeled with ChemKnow and BXDE
04/06/2021 Bugfixes in irc_analysis.sh (mopac2021) and Heuristics (crossed bonds)
05/28/2021 New keyword Use_LET for mopac TS optimizations
05/27/2021 New keywords (recalc and Hookean) and improved efficiency
05/14/2021 ChemKnow improved and calcfc in g09 ts opt calcs
05/10/2021 keyword tight_ts and bug in bxde
05/02/2021 kinetics module improved and bugs corrected
04/07/2021 in tors.sh do not consider rotation about bonds that belong to a ring
03/16/2021 mopac calculator updated to ase3.21.1
03/14/2021 Bugfixes
02/15/2021 2021 release. Revision 1007--> qcore high-level calcs available
10/20/2020 linked_paths in python and 1D rotors in rrkm
10/18/2020 bug fix in linked_paths.sh
10/14/2020 tutorial updated and bug fixes in DVV.py
10/05/2020 Density matrix read in freq calc (MOPAC) and new xtb parameters for better convergence
07/15/2020 Implemented interface with Entos Qcore
04/21/2020 Implemented ExtForce and fixed some bugs
01/28/2020 Simplified adjacency matrix from XYZ
01/21/2020 2020 version
12/02/2019 Bug in FINAL.sh
11/22/2019 Maximum number of paths set to 50 (in bbfs.f90).
11/16/2019 Check of input structure in amk.sh. Fragmented molecules are no longer valid.
09/16/2019 pdfs are now also generated in FINAL_HL
07/09/2019 if name of working dir is too long, name--->wrkdir
06/30/2019 amk acronym replaces old tsscds acronym
04/18/2019 MIT license
04/17/2019 The label of the starting min in the kmc simulations is in tsdirll/KMC/starting_minimum
04/15/2019 A bug in get_energy_g09_MP2.sh was corrected
04/01/2019 threads=1 has been added to the input files in the examples folder. The use of this keyword is highly recommented to avoid multhreading in MOPAC calculations for much better performance
03/01/2019 A bug in the kmc.f90 source file was corrected

Return to AutoMeKin